achim kramer lab

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25.12.2012 : no seminar




18.12.2012 : Sebastian
CLOCK is a substrate of SUMO and sumoylation of CLOCK upregulates the transcriptional activity of estrogen receptor-?
Li S, Wang M, Ao X, Chang AK, Yang C, Zhao F, Bi H, Liu Y, Xiao L, Wu H.
Oncogene. 2012 Nov 19. doi: 10.1038/onc.2012.518. [Epub ahead of print]

11.12.2012 : Achim
Paper of special interest



04.12.2012 : Ute
Aging Differentially Affects the Re-entrainment Response of Central and Peripheral Circadian Oscillators.
Sellix MT, Evans JA, Leise TL, Castanon-Cervantes O, Hill DD, Delisser P, Block GD, Menaker M, Davidson AJ.
J Neurosci. 2012 Nov 14;32(46):16193-16202.

27.11.2012 : Manjana
Aberrant light directly impairs mood and learning through melanopsin-expressing neurons.
LeGates TA, Altimus CM, Wang H, Lee HK, Yang S, Zhao H, Kirkwood A, Weber ET, Hattar S.
Nature. 2012 Nov 14;491(7425):594-8. doi: 10.1038/nature11673. Epub 2012 Nov 14.

20.11.2012 : Jeannine
CAVIN-3 regulates circadian period length and PER:CRY protein abundance and interactions.
Schneider K, Köcher T, Andersin T, Kurzchalia T, Schibler U, Gatfield D.
EMBO Rep. 2012 Oct 19. doi: 10.1038/embor.2012.158. [Epub ahead of print]

13.11.2012 : no seminar




06.11.2012 : Bert
Global quantification of mammalian gene expression control.
Schwanhäusser B, Busse D, Li N, Dittmar G, Schuchhardt J, Wolf J, Chen W, Selbach M.
Nature. 2011 May 19;473(7347):337-42.

30.10.2012 : Erik
Circadian rhythm of redox state regulates excitability in suprachiasmatic nucleus neurons.
Wang TA, Yu YV, Govindaiah G, Ye X, Artinian L, Coleman TP, Sweedler JV, Cox CL, Gillette MU.
Science. 2012 Aug 17;337(6096):839-42.

23.10.2012 : Silke
USP2a protein deubiquitinates and stabilizes the circadian protein CRY1 in response to inflammatory signals.
Tong X, Buelow K, Guha A, Rausch R, Yin L.
J Biol Chem. 2012 Jul 20;287(30):25280-91

16.10.2012 : Sandra
Microscopy Lecture



09.10.2012 : Roman
Transcriptional Architecture and Chromatin Landscape of the Core Circadian Clock in Mammals.
Koike N, Yoo SH, Huang HC, Kumar V, Lee C, Kim TK, Takahashi JS.
Science. 2012 Aug 30. [Epub ahead of print]

02.10.2012 : no seminar




25.09.2012 : Bharath
Period coding of Bmal1 oscillators in the suprachiasmatic nucleus.
Myung J, Hong S, Hatanaka F, Nakajima Y, De Schutter E, Takumi T.
J Neurosci. 2012 Jun 27;32(26):8900-18.

18.09.2012 : no seminar - Chronobiological Summerschool Berlin




11.09.2012 : Sebastian
Cold-Inducible RNA-Binding Protein Modulates Circadian Gene Expression Posttranscriptionally.
Morf J, Rey G, Schneider K, Stratmann M, Fujita J, Naef F, Schibler U.
Science. 2012 Aug 23. [Epub ahead of print]

04.09.2012 : no seminar




28.08.2012 : Veronika
Core circadian protein CLOCK is a positive regulator of NF-?B-mediated transcription.
Spengler ML, Kuropatwinski KK, Comas M, Gasparian AV, Fedtsova N, Gleiberman AS, Gitlin II, Artemicheva NM, Deluca KA, Gudkov AV, Antoch MP.
Proc Natl Acad Sci U S A. 2012 Aug 15. [Epub ahead of print]

21.08.2012 : Achim
Feedback regulation of transcriptional termination by the mammalian circadian clock PERIOD complex.
Padmanabhan K, Robles MS, Westerling T, Weitz CJ.
Science. 2012 Aug 3;337(6094):599-602. Epub 2012 Jul 5.

14.08.2012 : Bert
Circadian clock protein cryptochrome regulates the expression of proinflammatory cytokines.
Narasimamurthy R, Hatori M, Nayak SK, Liu F, Panda S, Verma IM.
Proc Natl Acad Sci U S A. 2012 Jul 31;109(31):12662-7. Epub 2012 Jul 9.

07.08.2012 : Agnes
Brain-specific rescue of clock reveals system-driven transcriptional rhythms in peripheral tissue.
Hughes ME, Hong HK, Chong JL, Indacochea AA, Lee SS, Han M, Takahashi JS, Hogenesch JB.
PLoS Genet. 2012 Jul;8(7):e1002835. Epub 2012 Jul 26.

31.07.2012 : Katja
Internal Ribosomal Entry Site-Mediated Translation Is Important for Rhythmic PERIOD1 Expression.
Lee KH, Kim SH, Kim DY, Kim S, Kim KT.
PLoS One. 2012;7(5):e37936. Epub 2012 May 25.

24.07.2012 : Sabrina
Identification of Small Molecule Activators of Cryptochrome.
Hirota T, Lee JW, St John PC, Sawa M, Iwaisako K, Noguchi T, Pongsawakul PY, Sonntag T, Welsh DK, Brenner DA, Doyle FJ 3rd, Schultz PG, Kay SA.
Science. 2012 Jul 12. [Epub ahead of print]

18.07.2012 : Manjana
Mammalian Cry1 and Cry2 are essential for maintenance of circadian rhythms.
van der Horst GT, Muijtjens M, Kobayashi K, Takano R, Kanno S, Takao M, de Wit J, Verkerk A, Eker AP, van Leenen D, Buijs R, Bootsma D, Hoeijmakers JH, Yasui A.
Nature. 1999 Apr 15;398(6728):627-30.

10.07.2012 : Ute
Transplanted suprachiasmatic nucleus determines circadian period.
Ralph MR, Foster RG, Davis FC, Menaker M.
Science. 1990 Feb 23;247(4945):975-8.

03.07.2012 : Jeannine
Restricted feeding uncouples circadian oscillators in peripheral tissues from the central pacemaker in the suprachiasmatic nucleus.
Damiola F, Le Minh N, Preitner N, Kornmann B, Fleury-Olela F, Schibler U.
Genes Dev. 2000 Dec 1;14(23):2950-61.

26.06.2012 : Rupert
Genomic engineering with ZFNs and TALENs



19.06.2012 : Ibrahim
Light directs zebrafish period2 expression via conserved D and E boxes.
Vatine G, Vallone D, Appelbaum L, Mracek P, Ben-Moshe Z, Lahiri K, Gothilf Y, Foulkes NS.
PLoS Biol. 2009 Oct;7(10):e1000223. Epub 2009 Oct 27.

12.06.2012 : project seminar




05.06.2012 : Sandra
Peroxiredoxins are conserved markers of circadian rhythms
Edgar RS, Green EW, Zhao Y, van Ooijen G, Olmedo M, Qin X, Xu Y, Pan M, Valekunja UK, Feeney KA, Maywood ES, Hastings MH, Baliga NS, Merrow M, Millar AJ, Johnson CH, Kyriacou CP, O'Neill JS, Reddy AB.
Nature. 2012 May 16;485(7399):459-64. doi: 10.1038/nature11088.

29.05.2012 : Roman
Regulation of circadian behaviour and metabolism by REV-ERB-α and REV-ERB-β.
Cho H, Zhao X, Hatori M, Yu RT, Barish GD, Lam MT, Chong LW, DiTacchio L, Atkins AR, Glass CK, Liddle C, Auwerx J, Downes M, Panda S, Evans RM.
Nature. 2012 Mar 29;485(7396):123-7. doi: 10.1038/nature11048.

22.05.2012 : ?




15.05.2012 : no seminar




08.05.2012 : Sebastian
Single-cell resolution fluorescence imaging of circadian rhythms detected with a Nipkow spinning disk confocal system.
Enoki R, Ono D, Hasan MT, Honma S, Honma K.
J Neurosci Methods. 2012 May 30;207(1):72-9. Epub 2012 Mar 28.

01.05.2012 : no seminar




24.04.2012 : AG Westermark
Versatile regulation of multisite protein phosphorylation by the order of phosphate processing and protein-protein interactions.
Salazar C, Höfer T.
FEBS J. 2007 Feb;274(4):1046-61. Epub 2007 Jan 25.

17.04.2012 : ??




10.04.2012 : Achim




03.04.2012 : Katja
paper of special interest



27.03.2012 : Veronika
JNK regulates the photic response of the mammalian circadian clock.
Yoshitane H, Honma S, Imamura K, Nakajima H, Nishide SY, Ono D, Kiyota H, Shinozaki N, Matsuki H, Wada N, Doi H, Hamada T, Honma KI, Fukada Y.
EMBO Rep. 2012 Mar 23. doi: 10.1038/embor.2012.37. [Epub ahead of print]

22.03.2012 : Agnes
Casein kinase 1 proteomics reveal prohibitin 2 function in molecular clock.
Kategaya LS, Hilliard A, Zhang L, Asara JM, Ptá&ocaron;ek LJ, Fu YH.
PLoS One. 2012;7(2):e31987. Epub 2012 Feb 27.

13.03.2012 : Manjana
Disrupted circadian rhythms in a mouse model of schizophrenia.
Oliver PL, Sobczyk MV, Maywood ES, Edwards B, Lee S, Livieratos A, Oster H, Butler R, Godinho SI, Wulff K, Peirson SN, Fisher SP, Chesham JE, Smith JW, Hastings MH, Davies KE, Foster RG.
Curr Biol. 2012 Feb 21;22(4):314-9. Epub 2012 Jan 19.

06.03.2012 : Bert
The Circadian Clock Controls Toll-like Receptor 9-Mediated Innate and Adaptive Immunity.
Silver AC, Arjona A, Walker WE, Fikrig E.
Immunity. 2012 Feb 24;36(2):251-61.

28.02.2012 : Ute




21.02.2012 : Rupert
The human circadian metabolome.
Dallmann R, Viola AU, Tarokh L, Cajochen C, Brown SA.
Proc Natl Acad Sci U S A. 2012 Feb 14;109(7):2625-9. Epub 2012 Jan 31.

14.02.2012 : Vortrag Praktikantin




07.02.2012 : Jeannine
Identification of diverse modulators of central and peripheral circadian clocks by high-throughput chemical screening.
Chen Z, Yoo SH, Park YS, Kim KH, Wei S, Buhr E, Ye ZY, Pan HL, Takahashi JS.
Proc Natl Acad Sci U S A. 2012 Jan 3;109(1):101-6. Epub 2011 Dec 19.

31.01.2012 : Roman
PML regulates PER2 nuclear localization and circadian function.
Miki T, Xu Z, Chen-Goodspeed M, Liu M, Van Oort-Jansen A, Rea MA, Zhao Z, Lee CC, Chang KS.
EMBO J. 2012 Jan 24. doi: 10.1038/emboj.2012.1.

24.01.2012 : Veronika
Circadian Variation of the Response of T Cells to Antigen
Fortier EE, Rooney J, Dardente H, Hardy MP, Labrecque N, Cermakian N.
J Immunol. 2011 Dec 15;187(12):6291-300. Epub 2011 Nov 9.

17.01.2012 : Thomas
paper of special interest



10.01.2012 : Sabrina
A global circadian repressor controls antiphasic expression of metabolic genes in Neurospora.
Sancar G, Sancar C, Brügger B, Ha N, Sachsenheimer T, Gin E, Wdowik S, Lohmann I, Wieland F, Höfer T, Diernfellner A, Brunner M.
Mol Cell. 2011 Dec 9;44(5):687-97.